Co-expression analysis

Gene ID 1614746_at
Gene name hypothetical protein LOC100259225
Homology with ArabidopsisSimilar to At2g17860: pathogenesis-related thaumatin family protein (HF=6e-3)
Module size 6 genes
NF 0.91
%ile 99.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971614746_atCF214284hypothetical protein LOC100259225-6e-3At2g17860pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.9198.80.971611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinO.I.H.G.S.X.
0.9198.80.981611598_atCB970208hypothetical protein LOC100244034-7e+0At5g38630ACYB-1O.I.H.G.S.X.
0.8394.60.971616000_atCF215116hypothetical protein LOC100257299-2e-1At4g35025unknown proteinO.I.H.G.S.X.
0.7792.30.971622393_atCF373123proline rich protein 1-1e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.7189.50.971614877_atCB002982hypothetical protein LOC100254752-4e-4At1g63310-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.80.951607025_atCB340055hypothetical protein LOC100264105-4e-1At1g17100SOUL heme-binding family proteinO.I.H.G.S.X.
0.8695.10.961618487_atCF403542--1e+0At3g01980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.5375.20.971613941_atCA818531hypothetical protein LOC100251097-2e+0At1g65390ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)O.I.H.G.S.X.
0.5072.70.971607467_atCD800366hypothetical protein LOC100257154-4e+0At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.S.X.
0.4666.50.951610792_atCD714708--1e-6At3g08510ATPLC2 (PHOSPHOLIPASE C 2)O.I.H.G.S.X.
0.3548.50.951608001_atCB982653hypothetical protein LOC100247409-7e-2At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)O.I.H.G.S.X.
0.3141.30.961616685_atCF211776hypothetical protein LOC100244128-2e+0At4g24990ATGP4O.I.H.G.S.X.
0.2937.70.931609241_atCF414695similar to T23E18.17-8e-1At3g46613RTFL4 (ROTUNDIFOLIA LIKE 4)O.I.H.G.S.X.
0.2937.70.951620517_atCF414774similar to cysteine protease 14-8e-17At4g35350XCP1 (XYLEM CYSTEINE PEPTIDASE 1)O.I.H.G.S.X.
0.2632.00.941617748_a_atCD801712hypothetical protein LOC100262607-6e-3At4g37980ELI3-1 (ELICITOR-ACTIVATED GENE 3-1)O.I.H.G.S.X.

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.784.7GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
1.683.3GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.683.3GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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