Co-expression analysis

Gene ID 1614746_at
Gene name hypothetical protein LOC100259225
Homology with ArabidopsisSimilar to At2g17860: pathogenesis-related thaumatin family protein (HF=6e-3)
Module size 6 genes
NF 0.91
%ile 99.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971614746_atCF214284hypothetical protein LOC100259225-6e-3At2g17860pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.9198.80.971611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinO.I.H.G.S.X.
0.9198.80.981611598_atCB970208hypothetical protein LOC100244034-7e+0At5g38630ACYB-1O.I.H.G.S.X.
0.8394.60.971616000_atCF215116hypothetical protein LOC100257299-2e-1At4g35025unknown proteinO.I.H.G.S.X.
0.7792.30.971622393_atCF373123proline rich protein 1-1e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.7189.50.971614877_atCB002982hypothetical protein LOC100254752-4e-4At1g63310-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.784.7GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
1.683.3GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.683.3GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.5253.1.A1_at, orthologous to the query gene, 1614746_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7990.8Gma.5253.1.A1_atAt2g17860--6e-3At1g55840SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer proteinO.I.H.G.S.X.
0.9093.7GmaAffx.10323.1.S1_atAt2g17860--1e+0At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseO.I.H.G.S.X.
0.8693.0GmaAffx.62093.1.A1_atAt2g17860--6e-1At3g54180CDKB1O.I.H.G.S.X.
0.8592.8Gma.13204.1.S1_atAt2g17860--2e-8At1g29520AWPM-19-like membrane family proteinO.I.H.G.S.X.
0.8592.8GmaAffx.63553.1.S1_atAt2g17860--4e-3At1g14730-O.I.H.G.S.X.
0.8492.6Gma.13980.1.S1_atAt2g17860--2e+0At3g49744unknown proteinO.I.H.G.S.X.
0.8492.6Gma.3997.1.S1_atAt2g17860--2e+0At5g44100ckl7 (Casein Kinase I-like 7)O.I.H.G.S.X.
0.8392.5GmaAffx.37697.1.S1_atAt2g17860--4e+0At4g09970unknown proteinO.I.H.G.S.X.
0.8392.5GmaAffx.44716.1.A1_atAt2g17860--7e-1At4g35970APX5 (ASCORBATE PEROXIDASE 5)O.I.H.G.S.X.
0.8392.5GmaAffx.66982.1.S1_atAt2g17860--2e-1At1g08220-O.I.H.G.S.X.
0.8291.9Gma.17136.1.S1_s_atAt2g17860--6e-1At1g34270exostosin family proteinO.I.H.G.S.X.
0.8291.9GmaAffx.28001.1.S1_atAt2g17860--3e+0At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.
0.8191.7GmaAffx.15803.1.S1_atAt2g17860--2e-1At3g48660unknown proteinO.I.H.G.S.X.
0.8191.7Gma.3400.1.S1_atAt2g17860--2e+0At2g17130IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2)O.I.H.G.S.X.
0.8091.5GmaAffx.73021.1.S1_atAt2g17860--2e-5At4g35970APX5 (ASCORBATE PEROXIDASE 5)O.I.H.G.S.X.
0.7990.8Gma.5789.1.S1_atAt2g17860--5e-4At3g20570plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.7890.6Gma.5256.1.A1_atAt2g17860--3e+0At3g23165LCR42 (Low-molecular-weight cysteine-rich 42)O.I.H.G.S.X.
0.7689.7GmaAffx.61272.1.S1_atAt2g17860--1e-2At4g26130unknown proteinO.I.H.G.S.X.
0.7388.9GmaAffx.49959.1.S1_atAt2g17860--1e+0At4g12760unknown proteinO.I.H.G.S.X.
0.7087.1Gma.5256.2.S1_atAt2g17860--7e-2At3g20970NFU4O.I.H.G.S.X.
0.6786.1Gma.13204.2.A1_atAt2g17860--8e-1At3g57270BG1 (BETA-1,3-GLUCANASE 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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