Co-expression analysis

Gene ID	1614685_at
Gene name	hypothetical protein LOC100264962
Homology with Arabidopsis	Similar to At5g02280: synbindin, putative (HF=2e-18)
Module size	6 genes
NF	0.44
%ile	66.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1614685_at	CF515859	hypothetical protein LOC100264962	-	2e-18	At5g02280	synbindin, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1614645_at	CB917806	similar to putative anti-virus transcriptional factor	-	1e-4	At5g62910	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.97	1615134_at	CF213762	hypothetical protein LOC100259710	-	7e-9	At5g51040	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1613988_at	BM436608	similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome	-	8e-2	At1g53560	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1616236_at	CB007372	hypothetical protein LOC100260831	-	2e-22	At1g43900	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.97	1611475_at	CB976806	hypothetical protein LOC100267480	-	6e-26	At1g02305	cathepsin B-like cysteine protease, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.0	94.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.8	93.4	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.7	93.0	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.2	89.9	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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