Co-expression analysis

Gene ID	1614677_at
Gene name
Homology with Arabidopsis	Similar to At3g25640: unknown protein (HF=6e-2)
Module size	6 genes
NF	0.05
%ile	10.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.84	1614677_at	CF405759	-	-	6e-2	At3g25640	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1612549_at	CB913437	-	-	6e-6	At2g24590	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.96	1607049_s_at	CF514518	metallothionein	-	5e-19	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.95	1607097_at	CF609531	hypothetical protein LOC100245394	-	2e-28	At1g12250	thylakoid lumenal protein-related	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.97	1607580_s_at	AF501624.1	similar to histone H3 /// similar to histone H3	-	6e-87	At4g40040	histone H3.2	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.96	1612566_at	CF208882	-	-	4e-128	At2g47170	ARF1A1C	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.0	94.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.0	94.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.0	94.2	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.7	93.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.5	91.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.5	91.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.4	91.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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