Co-expression analysis

Gene ID	1614669_at
Gene name
Homology with Arabidopsis	Similar to At2g15390: FUT4 (HF=1e+0)
Module size	13 genes
NF	0.33
%ile	46.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	95.1	0.96	1614669_at	CF513785	-	-	1e+0	At2g15390	FUT4	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.95	1621199_at	CF204390.1	-	-	1e+1	At5g11440	CID5	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.96	1619053_s_at	CB035779	hypothetical protein LOC100256257	-	2e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1607451_at	CB345121	hypothetical protein LOC100260491	-	1e+0	At4g37685	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1610826_at	CF214236	hypothetical protein LOC100265882	-	1e-6	At1g05205	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1619402_at	CF517188	hypothetical protein LOC100252501	-	6e-2	At3g13710	PRA1.F4 (PRENYLATED RAB ACCEPTOR 1.F4)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1620757_at	CF372931	hypothetical protein LOC100260825	-	4e-3	At1g51600	TIFY2A	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.96	1619939_at	CB971326	-	-	2e+1	At5g43430	ETFBETA	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1617652_s_at	CF517834	hypothetical protein LOC100249964	-	3e-2	At3g63310	glutamate binding	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1616425_at	CF208709	hypothetical protein LOC100260616	-	5e-7	At2g32730	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1615183_at	CD800228	hypothetical protein LOC100246016	-	7e-15	At1g05360	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1619217_at	CF212944	-	-	8e-80	At1g10950	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1609946_at	CB006094	-	-	4e-1	At5g42080	ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.9	87.2	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.8	86.0	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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