Co-expression analysis

Gene ID 1614655_at
Gene name hypothetical protein LOC100267459
Homology with ArabidopsisSimilar to At5g45930: CHLI2 (MAGNESIUM CHELATASE I2) (HF=2e-61)
Module size 8 genes
NF 0.76
%ile 97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.981614655_atCB969062hypothetical protein LOC100267459-2e-61At5g45930CHLI2 (MAGNESIUM CHELATASE I2)O.I.H.G.S.X.
0.8695.10.981609228_atCF403419hypothetical protein LOC100247047-9e-5At2g21385unknown proteinO.I.H.G.S.X.
0.8293.90.981617061_s_atCD003896hypothetical protein LOC100243475-2e-15At5g55220trigger factor type chaperone family proteinO.I.H.G.S.X.
0.7189.50.991610716_atCF211147hypothetical protein LOC100265925-5e-16At3g15190chloroplast 30S ribosomal protein S20, putativeO.I.H.G.S.X.
0.7189.50.981615609_atCB971917hypothetical protein LOC100268043-1e-11At3g25920RPL15O.I.H.G.S.X.
0.7189.50.981606797_atCD714405similar to 50S ribosomal protein L17, chloroplastic-3e-8At3g54210ribosomal protein L17 family proteinO.I.H.G.S.X.
0.6787.90.981620684_atCA811105hypothetical protein LOC100244408-5e-10At1g64510ribosomal protein S6 family proteinO.I.H.G.S.X.
0.5375.20.981622495_atBM436258hypothetical protein LOC100248841-4e-26At1g74970RPS9 (RIBOSOMAL PROTEIN S9)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.692.5GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.491.3GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.491.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.390.7GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.390.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.390.7GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
2.390.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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