Co-expression analysis

Gene ID	1614655_at
Gene name	hypothetical protein LOC100267459
Homology with Arabidopsis	Similar to At5g45930: CHLI2 (MAGNESIUM CHELATASE I2) (HF=2e-61)
Module size	8 genes
NF	0.76
%ile	97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.98	1614655_at	CB969062	hypothetical protein LOC100267459	-	2e-61	At5g45930	CHLI2 (MAGNESIUM CHELATASE I2)	O.I.	H.G.	S.X.	Please select
0.86	95.1	0.98	1609228_at	CF403419	hypothetical protein LOC100247047	-	9e-5	At2g21385	unknown protein	O.I.	H.G.	S.X.	Please select
0.82	93.9	0.98	1617061_s_at	CD003896	hypothetical protein LOC100243475	-	2e-15	At5g55220	trigger factor type chaperone family protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1610716_at	CF211147	hypothetical protein LOC100265925	-	5e-16	At3g15190	chloroplast 30S ribosomal protein S20, putative	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1615609_at	CB971917	hypothetical protein LOC100268043	-	1e-11	At3g25920	RPL15	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1606797_at	CD714405	similar to 50S ribosomal protein L17, chloroplastic	-	3e-8	At3g54210	ribosomal protein L17 family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1620684_at	CA811105	hypothetical protein LOC100244408	-	5e-10	At1g64510	ribosomal protein S6 family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1622495_at	BM436258	hypothetical protein LOC100248841	-	4e-26	At1g74970	RPS9 (RIBOSOMAL PROTEIN S9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.6	92.5	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.4	91.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.3	90.7	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.3	90.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.3	90.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.3	90.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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