Co-expression analysis

Gene ID	1614557_s_at
Gene name	hypothetical protein LOC100243157
Homology with Arabidopsis	Similar to At2g03120: ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) (HF=3e-62)
Module size	6 genes
NF	0.60
%ile	87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.99	1614557_s_at	CF405834	hypothetical protein LOC100243157	-	3e-62	At2g03120	ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1620796_at	CF208990	hypothetical LOC100245990	-	4e-5	At3g24315	AtSec20	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.98	1615472_at	CB346188	hypothetical LOC100243131	-	7e-11	At1g48790	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1620526_at	BQ799509	hypothetical protein LOC100261578	-	1e-104	At1g54340	ICDH (ISOCITRATE DEHYDROGENASE)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1613126_at	CF214395	hypothetical protein LOC100232876	-	5e-35	At5g41950	binding	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1608478_at	CB969550	hypothetical protein LOC100246825	-	2e-17	At5g09810	ACT7 (ACTIN 7)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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