Co-expression analysis

Gene ID 1614555_at
Gene name hypothetical protein LOC100254478
Homology with ArabidopsisSimilar to At5g45300: BMY2 (BETA-AMYLASE 2) (HF=2e-13)
Module size 9 genes
NF 0.52
%ile 77.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.981614555_atCF518554hypothetical protein LOC100254478-2e-13At5g45300BMY2 (BETA-AMYLASE 2)O.I.H.G.S.X.
0.6787.90.991619715_atCF207152hypothetical protein LOC100243011-5e-39At1g30470SIT4 phosphatase-associated family proteinO.I.H.G.S.X.
0.6484.70.981619013_atCF514808hypothetical protein LOC100242671-3e-32At1g03260-O.I.H.G.S.X.
0.6081.90.981622731_atCF403287hypothetical protein LOC100257054-8e-12At3g55070-O.I.H.G.S.X.
0.5475.70.981613905_atCF210463hypothetical protein LOC100254141-3e-13At5g08160ATPK3O.I.H.G.S.X.
0.4260.10.991613731_atCF513972hypothetical protein LOC100248748-2e-5At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.
0.4057.70.991612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)O.I.H.G.S.X.
0.3853.60.991615804_atCF403733--4e-2At5g65910BSD domain-containing proteinO.I.H.G.S.X.
0.3751.70.981618759_atCB348270hypothetical protein LOC100256813-1e+0At1g76010nucleic acid bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
4.497.3GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
4.297.1GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
4.196.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
4.096.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.996.6GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.996.6GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.696.0GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
3.696.0GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.696.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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