Co-expression analysis

Gene ID 1614506_at
Gene name hypothetical protein LOC100241962
Homology with ArabidopsisSimilar to At4g34050: caffeoyl-CoA 3-O-methyltransferase, putative (HF=1e+0)
Module size 7 genes
NF 0.35
%ile 51.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.931614506_atCD801364hypothetical protein LOC100241962-1e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.4767.70.951617328_atCF214435hypothetical protein LOC100247950-8e-43At4g36750quinone reductase family proteinO.I.H.G.S.X.
0.3650.70.941622282_atCD712313hypothetical protein LOC100245852-2e-10At1g06020pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.2937.70.951608328_s_atCF609703hypothetical protein LOC100257331-3e-2At1g75388CPuORF5 (Conserved peptide upstream open reading frame 5)O.I.H.G.S.X.
0.2937.70.951613676_atCB002629hypothetical protein LOC100266011-4e+0At3g19200unknown proteinO.I.H.G.S.X.
0.2734.00.931610591_atCB923320hypothetical protein LOC100251627-1e-5At2g46370JAR1 (JASMONATE RESISTANT 1)O.I.H.G.S.X.
0.2022.40.931615815_atCF207323similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)-5e-23At3g49290ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.6GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
7.499.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.497.3GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.196.9GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.896.4GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.696.0GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.595.7GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.495.5GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.294.9GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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