Co-expression analysis

Gene ID	1614453_at
Gene name	hypothetical protein LOC100259029
Homology with Arabidopsis	Similar to At5g18910: protein kinase family protein (HF=2e+0)
Module size	9 genes
NF	0.40
%ile	59.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	79.4	0.98	1614453_at	BQ798141	hypothetical protein LOC100259029	-	2e+0	At5g18910	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.99	1621088_at	CD798707	hypothetical protein LOC100242595	-	6e-87	At4g02580	NADH-ubiquinone oxidoreductase 24 kDa subunit, putative	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.99	1616337_at	CB914494	hypothetical protein LOC100246803	-	1e-9	At3g07170	sterile alpha motif (SAM) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1612924_s_at	CD798445	hypothetical protein LOC100240752	-	2e-22	At4g14800	PBD2 (20S PROTEASOME BETA SUBUNIT 2)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1609424_at	CD798745	hypothetical protein LOC100263956	-	7e-30	At3g13670	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.99	1619540_at	CF208875	hypothetical protein LOC100263170	-	1e-4	At5g54430	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.99	1607119_at	CD799254	hypothetical protein LOC100247980	-	6e-71	At1g78920	AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.99	1611523_at	CD801109	hypothetical protein LOC100267138	-	6e-16	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.99	1622424_at	CA813635	hypothetical protein LOC100265980	-	9e-11	At5g44200	CBP20 (CAP-BINDING PROTEIN 20)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	99.3	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.8	98.6	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.6	98.4	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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