Co-expression analysis

Gene ID 1614429_at
Gene name
Homology with ArabidopsisSimilar to At1g79100: arginine/serine-rich protein-related (HF=1e+0)
Module size 25 genes
NF 0.30
%ile 42.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.901614429_atBQ792837--1e+0At1g79100arginine/serine-rich protein-relatedO.I.H.G.S.X.
0.6685.10.931619727_atCF512965--2e+0At3g04790ribose 5-phosphate isomerase-relatedO.I.H.G.S.X.
0.6384.30.921618671_atCB347847--4e+0At5g42930triacylglycerol lipaseO.I.H.G.S.X.
0.4260.10.941608276_atCF405421--2e+0At2g03710SEP4 (SEPALLATA 4)O.I.H.G.S.X.
0.4057.70.961608540_atCB973488--1e-32At3g5343060S ribosomal protein L12 (RPL12B)O.I.H.G.S.X.
0.3650.70.961615501_atCF517672--4e+0At3g11660NHL1O.I.H.G.S.X.
0.3548.50.961619679_atCB977224--1e+0At3g15690biotin carboxyl carrier protein of acetyl-CoA carboxylase-relatedO.I.H.G.S.X.
0.3243.10.951607720_atCB975677--2e+1At5g43680unknown proteinO.I.H.G.S.X.
0.3141.30.951612097_atCB348571--6e-5At4g23400PIP1O.I.H.G.S.X.
0.2937.70.961610296_atCF209947--1e+0At4g29290LCR26 (Low-molecular-weight cysteine-rich 26)O.I.H.G.S.X.
0.2837.70.941620479_atCD716240--2e-13At2g29210splicing factor PWI domain-containing proteinO.I.H.G.S.X.
0.2837.70.961612822_atCF513105hypothetical protein LOC100251960-4e-2At1g09645unknown proteinO.I.H.G.S.X.
0.2734.00.951620984_atCB975678--4e+0At1g44094unknown proteinO.I.H.G.S.X.
0.2734.00.941608059_atCF405569--3e+0Atcg00900-O.I.H.G.S.X.
0.2632.00.961618926_atCB976221--6e-1At5g22608unknown proteinO.I.H.G.S.X.
0.2530.50.961619217_atCF212944--8e-80At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.2428.70.971619095_s_atCB341757hypothetical protein LOC100257742-8e-8At5g63280zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2225.60.971612900_atCD797784hypothetical protein LOC100259949-5e+0At5g44585unknown proteinO.I.H.G.S.X.
0.1920.90.971619141_atCD801026--2e-1At5g42655-O.I.H.G.S.X.
0.1718.20.961611380_atCF512134--1e+0At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.1616.70.951612087_atCB339591--2e+0At2g28140unknown proteinO.I.H.G.S.X.
0.1616.70.971612915_atCF212348hypothetical protein LOC100247677-8e-115At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.
0.1414.40.971612420_atCD717999hypothetical protein LOC100252211-2e+0At1g19086unknown proteinO.I.H.G.S.X.
0.1212.10.971608170_atCD798362hypothetical protein LOC100248761-2e-24At1g04850ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.1212.10.971607450_atCB343161hypothetical protein LOC100264463-1e+0At5g11070unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.189.1GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.784.7GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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