Co-expression analysis

Gene ID 1614418_at
Gene name flowering-related B-class MADS-box protein
Homology with ArabidopsisSimilar to At3g54340: AP3 (APETALA 3) (HF=9e-15)
Module size 6 genes
NF 0.79
%ile 97.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.991614418_atCF414182flowering-related B-class MADS-box protein-9e-15At3g54340AP3 (APETALA 3)O.I.H.G.S.X.
0.8394.60.981621644_atCB004591--3e-9At3g23690basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.7390.80.981612107_atCF405996hypothetical protein LOC100248597-6e+0At5g18040unknown proteinO.I.H.G.S.X.
0.7390.80.991614965_atBQ792730MADS-box protein 4-6e-36At1g24260SEP3 (SEPALLATA3)O.I.H.G.S.X.
0.6787.90.991611561_a_atCD800254hypothetical protein LOC100240998-2e-2At4g36850-O.I.H.G.S.X.
0.5679.40.981608432_s_atCB004591hypothetical protein LOC100266054-3e-9At3g23690basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.698.4GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.597.5GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147682Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation11Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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