Co-expression analysis

Gene ID 1614380_at
Gene name hypothetical protein LOC100267715
Homology with ArabidopsisSimilar to At2g17770: ATBZIP27 (HF=2e-1)
Module size 6 genes
NF 0.57
%ile 84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.991614380_atCD797929hypothetical protein LOC100267715-2e-1At2g17770ATBZIP27O.I.H.G.S.X.
0.8093.60.991618974_atCF518903hypothetical protein LOC100264692-9e-40At5g11900eukaryotic translation initiation factor SUI1 family proteinO.I.H.G.S.X.
0.5577.30.991616080_atCF511120hypothetical protein LOC100254062-5e-13At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)O.I.H.G.S.X.
0.5072.70.991613829_atCF213502hypothetical protein LOC100256716-6e-18At1g57620emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.4666.50.991606962_atCF405430hypothetical protein LOC100244131-4e-13At5g14240-O.I.H.G.S.X.
0.4260.10.991612642_atCB970994hypothetical protein LOC100244706-5e+0At3g43570GDSL-motif lipase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
4.797.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
4.497.3GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO
4.096.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.996.6GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
3.896.4GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14Link to GEO
3.696.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.395.2GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
3.194.6GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
3.194.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage