Co-expression analysis

Gene ID	1614345_s_at
Gene name	hypothetical protein LOC100248615
Homology with Arabidopsis	Similar to At4g26670: mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (HF=1e-19)
Module size	11 genes
NF	0.47
%ile	70.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.51	73.2	0.94	1614345_s_at	CA814149	hypothetical protein LOC100248615	-	1e-19	At4g26670	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.96	1612750_at	CA817715	hypothetical protein LOC100248749	-	2e+0	At3g55390	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.70	88.6	0.96	1613696_at	CA817501	hypothetical protein LOC100242891	-	1e+0	At2g25720	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	84.7	0.96	1621525_at	CB342932	-	-	2e-12	At1g67660	DNA binding / nuclease	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1612576_at	CF209978	hypothetical protein LOC100242562	-	4e-2	At1g47720	OSB1 (Organellar Single-stranded)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1618846_at	CD011927	hypothetical protein LOC100258439	-	2e-15	At3g45050	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.96	1614467_at	CA818630	hypothetical protein LOC100266972	-	7e-25	At2g22230	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.96	1613933_at	CF405495	hypothetical protein LOC100247785	-	9e-1	At1g72020	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.96	1617670_at	CF211965	hypothetical protein LOC100260576	-	8e-90	At2g21170	TIM (TRIOSEPHOSPHATE ISOMERASE)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1613362_at	CB339870	hypothetical protein LOC100242250	-	5e-3	At5g14710	-	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1619615_s_at	CF212724	chloroplast chaperonin 21	-	1e-17	At5g20720	CPN20 (CHAPERONIN 20)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.8	86.0	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
1.7	84.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.6	83.3	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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