Co-expression analysis

Gene ID 1614311_at
Gene name hypothetical protein LOC100264243
Homology with ArabidopsisSimilar to At1g15780: unknown protein (HF=2e-6)
Module size 14 genes
NF 0.44
%ile 65.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.951614311_atCF516097hypothetical protein LOC100264243-2e-6At1g15780unknown proteinO.I.H.G.S.X.
0.6787.90.961607649_atCB971586--4e-1At2g37570SLT1 (sodium- and lithium-tolerant 1)O.I.H.G.S.X.
0.5779.80.971621393_atCF514723hypothetical protein LOC100241190-2e+0At3g05520F-actin capping protein alpha subunit family proteinO.I.H.G.S.X.
0.5072.70.971614203_atCF518409hypothetical protein LOC100266138-2e-6At1g19860zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.5072.70.971616106_atCB970099hypothetical protein LOC100257573-1e+0At1g09935phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.4564.60.971620897_atCF603365similar to F-box-containing protein 2-3e-4At1g06110SKIP16 (SKP1/ASK-interacting protein 16)O.I.H.G.S.X.
0.4260.10.971618149_atCB973980hypothetical protein LOC100266068-3e-4At4g17330ATG2484-1O.I.H.G.S.X.
0.3954.90.971611921_atCF210910hypothetical protein LOC100262620-8e-11At4g17570zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.3548.50.971615235_atCD717990hypothetical protein LOC100262830-1e-16At3g43240ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.3446.80.971617898_atCF605263hypothetical protein LOC100244372-3e-1At5g49610F-box family proteinO.I.H.G.S.X.
0.3243.10.971612774_atCF210198hypothetical protein LOC100261536-2e+0At5g40900unknown proteinO.I.H.G.S.X.
0.2937.70.971614286_atCB970515hypothetical protein LOC100240938-9e-6At1g54610protein kinase family proteinO.I.H.G.S.X.
0.2837.70.971616242_atCF213196hypothetical protein LOC100263350-2e-1At4g18500unknown proteinO.I.H.G.S.X.
0.2734.00.971611078_a_atCF518728hypothetical protein LOC100260925-1e-7At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.198.1GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.797.7GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.797.7GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.297.1GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.294.9GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.194.6GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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