Co-expression analysis

Gene ID	1614293_at
Gene name	hypothetical protein LOC100257708
Homology with Arabidopsis	Similar to At5g21430: DNAJ heat shock N-terminal domain-containing protein (HF=5e-3)
Module size	8 genes
NF	0.69
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.98	1614293_at	CD719387	hypothetical protein LOC100257708	-	5e-3	At5g21430	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.82	93.9	0.98	1613266_at	CA815997	hypothetical protein LOC100250168	-	2e+0	At3g16690	nodulin MtN3 family protein	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.99	1608822_at	CF211356	hypothetical protein LOC100246732	-	8e-6	At3g46780	PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE 16)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1611924_at	CA817406	hypothetical protein LOC100244683	-	2e-9	At1g55670	PSAG (PHOTOSYSTEM I SUBUNIT G)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1617206_s_at	CB340600	hypothetical protein LOC100244962	-	8e-1	At5g67600	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1607453_at	CA814565	hypothetical protein LOC100243309	-	6e-3	At5g08050	-	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.99	1613642_at	CB002851	hypothetical protein LOC100244962	-	9e-18	At1g08380	PSAO (photosystem I subunit O)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1621672_at	CB342264	hypothetical protein LOC100267324	-	2e-34	At5g05740	EGY2	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM436365	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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