Co-expression analysis

Gene ID	1614231_s_at
Gene name	hypothetical protein LOC100245250
Homology with Arabidopsis	Similar to At3g15360: TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4) (HF=3e-5)
Module size	6 genes
NF	0.68
%ile	93.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.98	1614231_s_at	CB970079	hypothetical protein LOC100245250	-	3e-5	At3g15360	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1611247_s_at	CF206748.1	similar to cytochrome f	-	2e+0	At1g65490	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1616847_s_at	CA816751	hypothetical protein LOC100267942	-	2e-12	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1610039_s_at	CA817529	similar to NADH-plastoquinone oxidoreductase subunit K	-	0	Atcg00480	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1613581_at	CB981734	hypothetical protein LOC100262899	-	1e-17	At3g17800	-	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1613691_s_at	CF511746	hypothetical protein LOC100254533	-	5e-35	At2g05100	LHCB2.1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.1	94.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.6	92.5	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.4	91.3	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.4	91.3	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.4	91.3	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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