Co-expression analysis

Gene ID	1614136_at
Gene name	hypothetical protein LOC100246668
Homology with Arabidopsis	Similar to At5g47670: NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6) (HF=7e-55)
Module size	9 genes
NF	0.72
%ile	95.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.83	1614136_at	CB347754	hypothetical protein LOC100246668	-	7e-55	At5g47670	NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)	O.I.	H.G.	S.X.	Please select
0.89	95.5	0.93	1608743_at	CB348761	-	-	2e+0	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.88	95.4	0.93	1613470_at	BQ792870	hypothetical protein LOC100254431	-	7e-5	At5g07500	PEI1	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.94	1612730_at	CB349284	similar to seed specific protein Bn15D18B	-	2e+0	At4g33550	lipid binding	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.95	1616160_a_at	CB977336	hypothetical protein LOC100261550	-	6e-10	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	O.I.	H.G.	S.X.	Please select
0.74	91.0	0.94	1620844_at	CB978855	hypothetical protein LOC100264473	-	3e-14	At5g50260	cysteine proteinase, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1618848_at	CB977336	hypothetical protein LOC100261550	-	6e-10	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.94	1608617_at	CB922233	hypothetical protein LOC100253171	-	9e-3	At3g55646	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.93	1617161_at	CB347813	hypothetical LOC100252186	-	5e-1	At4g21980	APG8A (AUTOPHAGY 8A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.0	88.2	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
1.9	87.2	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
1.8	86.0	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
1.7	84.7	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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