Co-expression analysis

Gene ID 1614120_at
Gene name
Homology with ArabidopsisSimilar to At5g40550: unknown protein (HF=4e-3)
Module size 7 genes
NF 0.56
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.981614120_atCB349861--4e-3At5g40550unknown proteinO.I.H.G.S.X.
0.5980.60.981619122_s_atCF515522hypothetical protein LOC100244610-3e-26At5g38470DNA repair protein RAD23, putativeO.I.H.G.S.X.
0.5577.30.981613621_s_atCD721086hypothetical protein LOC100246359-3e-1At5g58412-O.I.H.G.S.X.
0.5375.20.981609942_atCF210968hypothetical protein LOC100262467-5e+0At5g67580TRB2O.I.H.G.S.X.
0.4868.80.981611974_atCF208396hypothetical protein LOC100258926-9e-27At2g15430NRPB3O.I.H.G.S.X.
0.4464.10.991613208_atCF209522hypothetical protein LOC100267894-8e-38At1g16610SR45O.I.H.G.S.X.
0.4057.70.991606807_atBQ794559hypothetical protein LOC100264697-7e-21At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
3.094.2GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO
2.591.9GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.390.7GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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