Co-expression analysis

Gene ID	1614112_at
Gene name	hypothetical protein LOC100252349
Homology with Arabidopsis	Similar to At5g42190: ASK2 (ARABIDOPSIS SKP1-LIKE 2) (HF=3e-11)
Module size	6 genes
NF	0.48
%ile	72.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.99	1614112_at	BQ797230	hypothetical protein LOC100252349	-	3e-11	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1608813_s_at	BQ795140	hypothetical protein LOC100255523	-	5e-84	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1615080_at	CB921263	hypothetical protein LOC100267377	-	7e-3	At3g52660	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1612461_at	CB969270	hypothetical protein LOC100257379	-	1e-1	At3g10220	tubulin folding cofactor B	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1606718_at	CA817648	hypothetical protein LOC100254624	-	2e-93	At5g17060	ATARFB1B	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.99	1621088_at	CD798707	hypothetical protein LOC100242595	-	6e-87	At4g02580	NADH-ubiquinone oxidoreductase 24 kDa subunit, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.5	95.7	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.3	90.7	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436365	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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