Co-expression analysis

Gene ID	1614098_at
Gene name	hypothetical protein LOC100267240
Homology with Arabidopsis	Similar to At2g21050: amino acid permease, putative (HF=6e-18)
Module size	6 genes
NF	0.02
%ile	4.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.85	1614098_at	CF608417	hypothetical protein LOC100267240	-	6e-18	At2g21050	amino acid permease, putative	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1612297_at	CA812105	hypothetical protein LOC100244787	-	2e-2	At5g12410	THUMP domain-containing protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.95	1620772_at	CF607066	hypothetical protein LOC100252015	-	3e-26	At5g53620	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.95	1608757_at	CB349275	hypothetical protein LOC100266172	-	3e-17	At5g14250	COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.96	1609756_at	CF604406	hypothetical protein LOC100263684	-	6e-3	At1g18830	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.86	1612060_at	CB346335	hypothetical protein LOC100267240	-	3e-10	At5g01240	amino acid permease, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.8	93.4	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.4	91.3	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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