Co-expression analysis

Gene ID	1614045_at
Gene name	hypothetical protein LOC100267863
Homology with Arabidopsis	Similar to At4g36220: FAH1 (FERULIC ACID 5-HYDROXYLASE 1) (HF=8e-11)
Module size	17 genes
NF	0.51
%ile	76.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.88	1614045_at	CF604589	hypothetical protein LOC100267863	-	8e-11	At4g36220	FAH1 (FERULIC ACID 5-HYDROXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.65	85.0	0.91	1607713_s_at	AF487826.1	serine hydrolase-like	-	1e-1	At4g26210	mitochondrial ATP synthase g subunit family protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.92	1618355_at	CB837772	-	-	1e+0	At2g16750	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.62	83.3	0.90	1613265_s_at	CB972047	hypothetical protein LOC100251662	-	9e-9	At1g05000	tyrosine specific protein phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.58	79.8	0.88	1610363_at	CB979583	hypothetical protein LOC100267452	-	9e-32	At3g62150	PGP21 (P-GLYCOPROTEIN 21)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.91	1615458_at	CB969727	hypothetical protein LOC100255664	-	2e+0	At5g16490	RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)	O.I.	H.G.	S.X.	Please select
0.54	75.7	0.92	1612482_at	CA809174	hypothetical protein LOC100258468	-	1e-9	At1g60440	ATPANK1 (PANTOTHENATE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.51	73.2	0.92	1609984_at	CB343408	hypothetical protein LOC100262346	-	1e+0	At4g15093	catalytic LigB subunit of aromatic ring-opening dioxygenase family	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.94	1617361_at	CF404356	hypothetical protein LOC100244017	-	3e-50	At4g35630	PSAT	O.I.	H.G.	S.X.	Please select
0.45	64.6	0.91	1614133_at	CD711415	hypothetical protein LOC100255873	-	5e-2	At1g43800	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.93	1607697_at	CF214298	-	-	4e-47	At1g20270	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.93	1615694_at	BQ799849	hypothetical protein LOC100257251	-	1e+0	At5g39670	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.92	1614141_at	CA817693	hypothetical protein LOC100265131	-	1e-9	At2g31090	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.91	1621937_at	CK138151.1	hypothetical protein LOC100245655	-	2e-1	At4g02810	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.94	1618716_at	CB917669	similar to Os06g0665100	-	1e-22	At5g44730	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.94	1620725_at	BQ795649	hypothetical protein LOC100249240	-	4e-1	At4g37445	-	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.92	1611759_at	CA808115	hypothetical protein LOC100258468	-	4e-13	At1g60440	ATPANK1 (PANTOTHENATE KINASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.1	89.1	GSM147690	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	19
1.8	86.0	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
1.8	86.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.7	84.7	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.6	83.3	GSM436405	V. riparia (VR, PI588259) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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