Co-expression analysis

Gene ID 1614010_at
Gene name hypothetical LOC100246762
Homology with ArabidopsisSimilar to At1g60390: BURP domain-containing protein / polygalacturonase, putative (HF=4e+0)
Module size 6 genes
NF 0.51
%ile 76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.981614010_atCF518977hypothetical LOC100246762-4e+0At1g60390BURP domain-containing protein / polygalacturonase, putativeO.I.H.G.S.X.
0.6081.90.981607582_atCB349344hypothetical protein LOC100260114-1e+0At2g23660LBD10 (LOB DOMAIN-CONTAINING PROTEIN 10)O.I.H.G.S.X.
0.5375.20.981609735_atCF372575hypothetical protein LOC100249713-1e-75At1g50030TOR (TARGET OF RAPAMYCIN)O.I.H.G.S.X.
0.5072.70.981611177_atCF518669hypothetical protein LOC100263874-2e-8At1g60200splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3853.60.981612962_atBQ794726--2e-2At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.2632.00.981619919_atCB913607--4e-1At5g48880PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.094.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.793.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.390.7GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.189.1GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
2.189.1GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.189.1GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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