Co-expression analysis

Gene ID 1613997_at
Gene name hypothetical protein LOC100246545
Homology with ArabidopsisSimilar to At3g57330: ACA11 (autoinhibited Ca2+-ATPase 11) (HF=3e-13)
Module size 28 genes
NF 0.38
%ile 56.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.921613997_atCB970314hypothetical protein LOC100246545-3e-13At3g57330ACA11 (autoinhibited Ca2+-ATPase 11)O.I.H.G.S.X.
0.5679.40.961615791_s_atCA809329hypothetical protein LOC100260183-2e-37At2g45990unknown proteinO.I.H.G.S.X.
0.4969.30.971615874_atCF403960hypothetical protein LOC100244966-2e-127At1g07110F2KP (FRUCTOSE-2,6-BISPHOSPHATASE)O.I.H.G.S.X.
0.4767.70.971615149_atCD009120hypothetical protein LOC100248175-4e+0At5g64200ATSC35O.I.H.G.S.X.
0.4767.70.951617180_s_atCA814162hypothetical protein LOC100247137-2e-33At3g56240CCH (COPPER CHAPERONE)O.I.H.G.S.X.
0.4767.70.941606993_atCB970398--4e+0At5g09820plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.4564.60.971614231_s_atCB970079hypothetical protein LOC100245250-3e-5At3g15360TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)O.I.H.G.S.X.
0.4361.50.971611605_s_atCF371905hypothetical protein LOC100257686-2e-3At2g31050plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4361.50.971607276_atCF202469.1--1e-13At3g23400plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.4158.70.961606809_atCF207836hypothetical protein LOC100250094-7e-5At5g60750CAAX amino terminal protease family proteinO.I.H.G.S.X.
0.4158.70.961613726_atCF205820.1--4e-13At4g15110CYP97B3O.I.H.G.S.X.
0.4158.70.971607055_atCB004334hypothetical protein LOC100264430-2e-2At1g44790ChaC-like family proteinO.I.H.G.S.X.
0.3954.90.961610176_atCB341974hypothetical protein LOC100266842-9e-16At4g36810GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1)O.I.H.G.S.X.
0.3650.70.971617988_atCA817224hypothetical protein LOC100243747-2e-4At2g3541033 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeO.I.H.G.S.X.
0.3548.50.961611247_s_atCF206748.1similar to cytochrome f-2e+0At1g65490unknown proteinO.I.H.G.S.X.
0.3446.80.961617645_s_atCA818763hypothetical protein LOC100257292-2e-96At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)O.I.H.G.S.X.
0.3345.70.971613691_s_atCF511746hypothetical protein LOC100254533-5e-35At2g05100LHCB2.1O.I.H.G.S.X.
0.3345.70.961613581_atCB981734hypothetical protein LOC100262899-1e-17At3g17800-O.I.H.G.S.X.
0.3345.70.951607964_s_atBM437259hypothetical protein LOC100257686-4e-1At5g08410FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)O.I.H.G.S.X.
0.3243.10.971609160_atCF215744hypothetical protein LOC100257877-2e-28At5g47110lil3 protein, putativeO.I.H.G.S.X.
0.3141.30.961616588_atBQ792380hypothetical protein LOC100268155-2e-20At2g25870haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.3141.30.971620133_atCA816897hypothetical protein LOC100256241-3e-2At4g13220unknown proteinO.I.H.G.S.X.
0.3141.30.971610544_s_atCB002886hypothetical protein LOC100246662-1e-25At4g01150unknown proteinO.I.H.G.S.X.
0.2937.70.971611683_s_atBQ799199similar to A_IG002N01.31 gene product-1e-30At4g01050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2837.70.971614898_atCF512424hypothetical protein LOC100246217-4e-12At1g08490CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE)O.I.H.G.S.X.
0.2428.70.961610065_atCF373155hypothetical protein LOC100260744-3e-1At4g09775-O.I.H.G.S.X.
0.2327.50.971620011_atCA809496O-acetylserine(thiol)-lyase-9e-27At3g59760OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C)O.I.H.G.S.X.
0.1920.90.961613891_atBQ797483hypothetical protein LOC100251254-6e-32At1g12640membrane bound O-acyl transferase (MBOAT) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.088.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
1.987.2GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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