Co-expression analysis

Gene ID	1613989_at
Gene name
Homology with Arabidopsis	Similar to At4g11600: ATGPX6 (GLUTATHIONE PEROXIDASE 6) (HF=7e-1)
Module size	6 genes
NF	0.04
%ile	8.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.91	1613989_at	CF414043	-	-	7e-1	At4g11600	ATGPX6 (GLUTATHIONE PEROXIDASE 6)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1612639_at	BQ792734	hypothetical protein LOC100261631	-	1e-6	At2g39910	binding	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1613521_at	CF514518	metallothionein	-	5e-19	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.96	1611160_at	CF415355	-	-	4e+0	At1g48330	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.97	1612360_at	CB970071	hypothetical protein LOC100244110	-	2e-152	At3g28710	H+-transporting two-sector ATPase, putative	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.97	1618063_at	CB980274	hypothetical protein LOC100259885	-	7e-6	At4g16830	nuclear RNA-binding protein (RGGA)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.0	94.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147701	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	30
2.9	93.8	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.7	93.0	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.5	91.9	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.5	91.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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