Co-expression analysis

Gene ID 1613933_at
Gene name hypothetical protein LOC100247785
Homology with ArabidopsisSimilar to At1g72020: unknown protein (HF=9e-1)
Module size 6 genes
NF 0.36
%ile 52.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4868.80.961613933_atCF405495hypothetical protein LOC100247785-9e-1At1g72020unknown proteinO.I.H.G.S.X.
0.6787.90.961612750_atCA817715hypothetical protein LOC100248749-2e+0At3g55390integral membrane family proteinO.I.H.G.S.X.
0.5577.30.961614345_s_atCA814149hypothetical protein LOC100248615-1e-19At4g26670mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.3243.10.961614467_atCA818630hypothetical protein LOC100266972-7e-25At2g22230beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.2632.00.961613362_atCB339870hypothetical protein LOC100242250-5e-3At5g14710-O.I.H.G.S.X.
0.1819.40.961619615_s_atCF212724chloroplast chaperonin 21-1e-17At5g20720CPN20 (CHAPERONIN 20)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.299.1GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.397.2GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.297.1GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.289.9GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.987.2GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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