Co-expression analysis

Gene ID 1613920_at
Gene name hypothetical protein LOC100260935
Homology with ArabidopsisSimilar to At1g07830: ribosomal protein L29 family protein (HF=2e+0)
Module size 6 genes
NF 0.34
%ile 49.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.861613920_atCB979957hypothetical protein LOC100260935-2e+0At1g07830ribosomal protein L29 family proteinO.I.H.G.S.X.
0.6081.90.891606834_s_atCB968939hypothetical protein LOC100249984-7e-5At2g30160mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.5072.70.921616666_atCF403684hypothetical protein LOC100249984-2e-8At2g30160mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.3650.70.901614841_atCB979453--6e+0At5g01610unknown proteinO.I.H.G.S.X.
0.2530.50.881615187_atCB001773hypothetical protein LOC100253047-6e-3At5g58003CPL4 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 4)O.I.H.G.S.X.
0.1616.70.871619051_atCF372188hypothetical protein LOC100252679-5e-6At2g03680SPR1 (SPIRAL1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.993.8GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.793.0GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.390.7GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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