Co-expression analysis

Gene ID	1613905_at
Gene name	hypothetical protein LOC100254141
Homology with Arabidopsis	Similar to At5g08160: ATPK3 (HF=3e-13)
Module size	6 genes
NF	0.44
%ile	66.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1613905_at	CF210463	hypothetical protein LOC100254141	-	3e-13	At5g08160	ATPK3	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.99	1613731_at	CF513972	hypothetical protein LOC100248748	-	2e-5	At5g63840	RSW3 (RADIAL SWELLING 3)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1615024_at	CB911127	hypothetical protein LOC100261826	-	2e-27	At2g05840	PAA2 (20S PROTEASOME SUBUNIT PAA2)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.99	1619715_at	CF207152	hypothetical protein LOC100243011	-	5e-39	At1g30470	SIT4 phosphatase-associated family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.99	1612122_at	BQ800294	hypothetical protein LOC100246317 /// hypothetical protein LOC100254873	-	1e-17	At3g13870	RHD3 (ROOT HAIR DEFECTIVE 3)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.99	1622693_at	CB976483	hypothetical protein LOC100246014	-	3e-10	At4g12650	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.9	98.6	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
5.7	98.5	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
5.5	98.4	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
5.2	98.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
4.3	97.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
4.2	97.1	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.9	96.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.8	96.4	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.6	96.0	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.9	93.8	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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