Co-expression analysis

Gene ID	1613889_at
Gene name	hypothetical protein LOC100248935
Homology with Arabidopsis	Similar to At5g66090: unknown protein (HF=3e+0)
Module size	8 genes
NF	0.62
%ile	88.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.96	1613889_at	CD801455	hypothetical protein LOC100248935	-	3e+0	At5g66090	unknown protein	O.I.	H.G.	S.X.	Please select
0.86	95.1	0.97	1620735_at	CA809248	hypothetical protein LOC100264528	-	3e-9	At1g56000	amine oxidase-related	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.97	1620009_at	CB968742	hypothetical protein LOC100250669	-	4e-100	At3g51820	G4	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1613646_at	CD797643	hypothetical protein LOC100244073	-	1e-16	At1g50170	ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1620024_s_at	CF511252	hypothetical protein LOC100245587	-	4e-9	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.97	1609160_at	CF215744	hypothetical protein LOC100257877	-	2e-28	At5g47110	lil3 protein, putative	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1620226_at	CF372108	hypothetical protein LOC100254018	-	2e-24	At4g33460	ATNAP13	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.97	1615706_at	CA816068	hypothetical protein LOC100257450	-	1e-4	At1g44920	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.7	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.5	97.5	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.4	97.3	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.2	94.9	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.1	94.6	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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