Co-expression analysis

Gene ID	1613845_at
Gene name	hypothetical protein LOC100253787
Homology with Arabidopsis	Similar to At5g01712: CPuORF48 (Conserved peptide upstream open reading frame 48) (HF=3e+0)
Module size	6 genes
NF	0.59
%ile	86.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.90	1613845_at	BQ796489	hypothetical protein LOC100253787	-	3e+0	At5g01712	CPuORF48 (Conserved peptide upstream open reading frame 48)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.90	1621220_at	CB919187	hypothetical protein LOC100242337	-	4e+0	At3g25719	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1608263_a_at	BQ794795	alcohol dehydrogenase 7	-	8e-35	At1g77120	ADH1 (ALCOHOL DEHYDROGENASE 1)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.92	1616783_at	CF405837	hypothetical protein LOC100267386	-	9e-11	At1g23800	ALDH2B7	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1607505_s_at	CF405837	hypothetical protein LOC100267386	-	9e-11	At1g23800	ALDH2B7	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.93	1614985_at	CB977218	hypothetical protein LOC100268005	-	3e-71	At5g19550	ASP2 (ASPARTATE AMINOTRANSFERASE 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	99.4	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.9	98.6	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.2	97.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.4	95.5	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.6	92.5	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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