Co-expression analysis

Gene ID 1613840_at
Gene name ABC transporter-like
Homology with ArabidopsisSimilar to At1g15520: PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) (HF=6e-7)
Module size 11 genes
NF 0.52
%ile 77.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6484.70.921613840_atBQ800291ABC transporter-like-6e-7At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.8494.80.941618314_atCB976771hypothetical protein LOC100251586-4e+0At3g23715SCRL13 (SCR-Like 13)O.I.H.G.S.X.
0.7088.60.951615915_atCF518741hypothetical protein LOC100267889-4e+0At2g24880self-incompatibility protein-relatedO.I.H.G.S.X.
0.6081.90.951614388_atCF210132hypothetical protein LOC100241529-2e-1At2g21610pectinesterase family proteinO.I.H.G.S.X.
0.5072.70.931611013_atCF518927hypothetical protein LOC100243798-4e-1At5g22890zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5072.70.961620426_atCF515986similar to DNA-binding protein-1e-20At1g13960WRKY4O.I.H.G.S.X.
0.4464.10.941618259_atBM436271hypothetical LOC100245758-3e-32At5g65780ATBCAT-5O.I.H.G.S.X.
0.3853.60.961615660_atCF215672similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-1e-51At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)O.I.H.G.S.X.
0.3853.60.961620491_atCD800015hypothetical protein LOC100257942-2e+0At5g56540AGP14 (ARABINOGALACTAN PROTEIN 14)O.I.H.G.S.X.
0.3650.70.951613676_atCB002629hypothetical protein LOC100266011-4e+0At3g19200unknown proteinO.I.H.G.S.X.
0.3039.40.941616579_atCF514965hypothetical protein LOC100260111-6e-2At3g12360ITN1 (INCREASED TOLERANCE TO NACL)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.1GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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