Co-expression analysis

Gene ID 1613834_at
Gene name hypothetical protein LOC100258445
Homology with ArabidopsisSimilar to At3g08030: unknown protein (HF=3e-9)
Module size 6 genes
NF 0.49
%ile 73.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961613834_atBQ797196hypothetical protein LOC100258445-3e-9At3g08030unknown proteinO.I.H.G.S.X.
0.4666.50.941619339_s_atCF215343ripening-related protein-like-3e+0At2g23780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4666.50.941621448_atBQ796150hypothetical protein LOC100251801-7e-3At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)O.I.H.G.S.X.
0.4361.50.951622477_atCF414040hypothetical protein LOC100261452-4e-4At3g22550senescence-associated protein-relatedO.I.H.G.S.X.
0.3548.50.951619667_atBQ797924similar to DRT100-8e-1At5g06860PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)O.I.H.G.S.X.
0.3039.40.951606826_atCF210409hypothetical protein LOC100250592-1e-7At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.692.5GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.491.3GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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