Co-expression analysis

Gene ID	1613829_at
Gene name	hypothetical protein LOC100256716
Homology with Arabidopsis	Similar to At1g57620: emp24/gp25L/p24 family protein (HF=6e-18)
Module size	6 genes
NF	0.57
%ile	83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.99	1613829_at	CF213502	hypothetical protein LOC100256716	-	6e-18	At1g57620	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1618974_at	CF518903	hypothetical protein LOC100264692	-	9e-40	At5g11900	eukaryotic translation initiation factor SUI1 family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1616824_at	CB341656	hypothetical protein LOC100255130	-	4e-5	At3g16760	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1615712_s_at	CB911214	similar to nascent polypeptide associated complex alpha	-	2e-43	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1614380_at	CD797929	hypothetical protein LOC100267715	-	2e-1	At2g17770	ATBZIP27	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.99	1606962_at	CF405430	hypothetical protein LOC100244131	-	4e-13	At5g14240	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
3.9	96.6	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.8	96.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.7	96.2	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
3.7	96.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.3	95.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.3	95.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.9	93.8	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.7	93.0	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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