Co-expression analysis

Gene ID	1613815_at
Gene name	hypothetical protein LOC100259564
Homology with Arabidopsis	Similar to At1g48130: ATPER1 (HF=2e-3)
Module size	6 genes
NF	0.73
%ile	95.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1613815_at	BQ793122	hypothetical protein LOC100259564	-	2e-3	At1g48130	ATPER1	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.97	1611316_at	CB007329	hypothetical protein LOC100266502	-	1e-1	At3g22500	ATECP31	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1616868_at	CB977238	hypothetical protein LOC100256467	-	3e-1	At3g52910	AtGRF4 (GROWTH-REGULATING FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1607519_at	CB976940	hypothetical protein LOC100263055	-	1e-2	At2g36640	ATECP63 (EMBRYONIC CELL PROTEIN 63)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1609832_at	CB916843	hypothetical protein LOC100267534	-	2e-8	At2g42000	plant EC metallothionein-like family 15 protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1621232_at	BQ793032	hypothetical protein LOC100249843	-	1e-7	At1g05510	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.7	84.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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