Co-expression analysis

Gene ID	1613731_at
Gene name	hypothetical protein LOC100248748
Homology with Arabidopsis	Similar to At5g63840: RSW3 (RADIAL SWELLING 3) (HF=2e-5)
Module size	9 genes
NF	0.55
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.99	1613731_at	CF513972	hypothetical protein LOC100248748	-	2e-5	At5g63840	RSW3 (RADIAL SWELLING 3)	O.I.	H.G.	S.X.	Please select
0.75	91.3	0.99	1606735_at	CB970224	hypothetical protein LOC100249353	-	4e+0	At3g15420	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1615804_at	CF403733	-	-	4e-2	At5g65910	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.99	1613905_at	CF210463	hypothetical protein LOC100254141	-	3e-13	At5g08160	ATPK3	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1619715_at	CF207152	hypothetical protein LOC100243011	-	5e-39	At1g30470	SIT4 phosphatase-associated family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1611870_at	CF414975	hypothetical protein LOC100247177	-	8e-152	At5g09740	HAM2 (histone acetyltransferase of the MYST family 2)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.99	1608671_at	CF511645	hypothetical protein LOC100243213	-	1e+0	At5g65609	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1612122_at	BQ800294	hypothetical protein LOC100246317 /// hypothetical protein LOC100254873	-	1e-17	At3g13870	RHD3 (ROOT HAIR DEFECTIVE 3)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1613769_at	CB970019	hypothetical protein LOC100265267	-	4e-48	At1g51690	ATB ALPHA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.9	96.6	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.6	96.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.5	95.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.4	95.5	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
3.4	95.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.3	95.2	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
3.2	94.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.1	94.6	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.0	94.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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