Co-expression analysis

Gene ID	1613696_at
Gene name	hypothetical protein LOC100242891
Homology with Arabidopsis	Similar to At2g25720: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1613696_at	CA817501	hypothetical protein LOC100242891	-	1e+0	At2g25720	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1612750_at	CA817715	hypothetical protein LOC100248749	-	2e+0	At3g55390	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.97	1621525_at	CB342932	-	-	2e-12	At1g67660	DNA binding / nuclease	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1618846_at	CD011927	hypothetical protein LOC100258439	-	2e-15	At3g45050	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1612576_at	CF209978	hypothetical protein LOC100242562	-	4e-2	At1g47720	OSB1 (Organellar Single-stranded)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.96	1619615_s_at	CF212724	chloroplast chaperonin 21	-	1e-17	At5g20720	CPN20 (CHAPERONIN 20)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147707	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	36
2.2	89.9	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
2.1	89.1	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.0	88.2	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147702	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	31
1.9	87.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
1.9	87.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.8	86.0	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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