Co-expression analysis

Gene ID	1613683_at
Gene name	hypothetical protein LOC100255739
Homology with Arabidopsis	Similar to At1g47560: unknown protein (HF=7e-15)
Module size	6 genes
NF	0.49
%ile	74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.98	1613683_at	CB976586	hypothetical protein LOC100255739	-	7e-15	At1g47560	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1609434_at	CF211782	hypothetical protein LOC100240790	-	1e-41	At3g42050	vacuolar ATP synthase subunit H family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1620593_at	BQ797219	hypothetical protein LOC100252659	-	1e-97	At1g30580	GTP binding	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1620819_at	BQ797308	hypothetical protein LOC100244100	-	1e-135	At1g54270	EIF4A-2	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1616080_at	CF511120	hypothetical protein LOC100254062	-	5e-13	At5g42970	COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1612642_at	CB970994	hypothetical protein LOC100244706	-	5e+0	At3g43570	GDSL-motif lipase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.2	94.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436352	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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