Co-expression analysis

Gene ID	1613676_at
Gene name	hypothetical protein LOC100266011
Homology with Arabidopsis	Similar to At3g19200: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.43
%ile	65.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.95	1613676_at	CB002629	hypothetical protein LOC100266011	-	4e+0	At3g19200	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1620426_at	CF515986	similar to DNA-binding protein	-	1e-20	At1g13960	WRKY4	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1620491_at	CD800015	hypothetical protein LOC100257942	-	2e+0	At5g56540	AGP14 (ARABINOGALACTAN PROTEIN 14)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1617496_s_at	BQ797047	hypothetical protein LOC100247953	-	7e-25	At3g12570	FYD	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1615365_at	CB973771	hypothetical protein LOC100253158	-	2e-14	At1g54130	RSH3 (RELA/SPOT HOMOLOG 3)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1610601_at	CF512111	hypothetical protein LOC100267859	-	1e+0	At2g12905	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.0	99.6	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.9	99.5	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.6	99.5	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.4	99.4	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.3	98.8	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.8	97.8	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.5	97.5	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.5	97.5	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.4	97.3	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.8	96.4	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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