Co-expression analysis

Gene ID 1613673_at
Gene name hypothetical protein LOC100255721
Homology with ArabidopsisSimilar to At5g09620: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (HF=3e-10)
Module size 6 genes
NF 0.47
%ile 70.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.961613673_atCF215004hypothetical protein LOC100255721-3e-10At5g09620octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.5072.70.961616863_atCD718777hypothetical protein LOC100259827-2e-11At2g16400BLH7 (bell1-like homeodomain 7)O.I.H.G.S.X.
0.5072.70.971609339_atCF518412hypothetical protein LOC100249314-5e-12At4g14900hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3853.60.961620920_atCB349109hypothetical protein LOC100245710-6e-5At1g70950-O.I.H.G.S.X.
0.3345.70.961613234_atCB970484hypothetical protein LOC100246461-4e+0At5g57650eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.2530.50.961619838_atBQ792821--2e+0At3g21170F-box family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.498.3GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.797.7GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.096.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.996.6GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.893.4GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
2.491.3GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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