Co-expression analysis

Gene ID	1613673_at
Gene name	hypothetical protein LOC100255721
Homology with Arabidopsis	Similar to At5g09620: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (HF=3e-10)
Module size	6 genes
NF	0.47
%ile	70.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.96	1613673_at	CF215004	hypothetical protein LOC100255721	-	3e-10	At5g09620	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1616863_at	CD718777	hypothetical protein LOC100259827	-	2e-11	At2g16400	BLH7 (bell1-like homeodomain 7)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1609339_at	CF518412	hypothetical protein LOC100249314	-	5e-12	At4g14900	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.96	1620920_at	CB349109	hypothetical protein LOC100245710	-	6e-5	At1g70950	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1613234_at	CB970484	hypothetical protein LOC100246461	-	4e+0	At5g57650	eukaryotic translation initiation factor-related	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.96	1619838_at	BQ792821	-	-	2e+0	At3g21170	F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	98.3	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.7	97.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.0	96.7	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.9	96.6	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
2.4	91.3	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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