Co-expression analysis

Gene ID 1613638_at
Gene name hypothetical protein LOC100266019
Homology with ArabidopsisSimilar to At1g75220: integral membrane protein, putative (HF=4e-11)
Module size 10 genes
NF 0.27
%ile 38.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.60.971613638_atCF209803hypothetical protein LOC100266019-4e-11At1g75220integral membrane protein, putativeO.I.H.G.S.X.
0.4361.50.981608521_atCA817176hypothetical protein LOC100253796-6e-16At2g47115unknown proteinO.I.H.G.S.X.
0.3650.70.981616873_atCF403277hypothetical protein LOC100241265-2e-1At4g21865unknown proteinO.I.H.G.S.X.
0.3039.40.981611492_s_atCF213500hypothetical protein LOC100266220-1e+0At1g49880Erv1/Alr family proteinO.I.H.G.S.X.
0.3039.40.981612217_atBQ797636hypothetical LOC100246657-3e-7At1g12050fumarylacetoacetase, putativeO.I.H.G.S.X.
0.2327.50.981615041_atCB979724hypothetical protein LOC100250228 /// hypothetical protein LOC100255090-2e-43At5g10350polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.2327.50.981607572_s_atCF208702similar to ADP-ribosylation factor-2e-117At1g10630ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)O.I.H.G.S.X.
0.2124.00.981612305_atBQ797467hypothetical protein LOC100263408-2e-12At3g15660GRX4 (GLUTAREDOXIN 4)O.I.H.G.S.X.
0.1920.90.981618170_atCD011825hypothetical protein LOC100243463-2e-40At5g60620phospholipid/glycerol acyltransferase family proteinO.I.H.G.S.X.
0.1111.30.981609459_atCF372527hypothetical protein LOC100255436-9e-11At4g16450unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.591.9GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.390.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.289.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.289.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage