Co-expression analysis

Gene ID 1613602_at
Gene name hypothetical LOC100254354
Homology with ArabidopsisSimilar to At5g02470: DPA (HF=8e+0)
Module size 6 genes
NF 0.35
%ile 51.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.961613602_atCF513870hypothetical LOC100254354-8e+0At5g02470DPAO.I.H.G.S.X.
0.5779.80.951621847_atCF202726.1hypothetical protein LOC100267426-4e+0At4g17310unknown proteinO.I.H.G.S.X.
0.3650.70.971621770_atCB978874--1e+0At1g10030ERG28 (Arabidopsis homolog of yeast ergosterol28)O.I.H.G.S.X.
0.3446.80.961617552_atCF202269.1hypothetical protein LOC100243817-4e-35At4g35020ARAC3 (ARABIDOPSIS RAC-LIKE 3)O.I.H.G.S.X.
0.2225.60.961613142_atCD802385--1e+0At5g15930PAM1 (plant adhesion molecule 1)O.I.H.G.S.X.
0.2124.00.961610863_atCD801616cullin 1-2e-19At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.497.3GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.196.9GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.796.2GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.796.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.395.2GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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