Co-expression analysis

Gene ID 1613562_at
Gene name hypothetical protein LOC100247400
Homology with ArabidopsisSimilar to At1g73010: phosphatase (HF=3e-2)
Module size 6 genes
NF 0.39
%ile 57.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.941613562_atCF210939hypothetical protein LOC100247400-3e-2At1g73010phosphataseO.I.H.G.S.X.
0.5577.30.941614951_atCF414795hypothetical protein LOC100266367-6e-2At5g51550EXL3 (EXORDIUM LIKE 3)O.I.H.G.S.X.
0.4464.10.941617919_atCF605842hypothetical protein LOC100261876-2e+0At4g26830catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.
0.3345.70.941607785_atCF607746hypothetical protein LOC100260283-3e-7At3g04290LTL1 (LI-TOLERANT LIPASE 1)O.I.H.G.S.X.
0.3345.70.951614517_x_atCK138139.1--4e-4At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.1212.10.941607767_atCF216032hypothetical protein LOC100252749-4e-1At3g57640protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.199.8GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
6.298.8GSM436422V. riparia (VR, PI588259) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
6.198.7GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
6.098.7GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.497.3GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.595.7GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.495.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.495.5GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.294.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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