Co-expression analysis

Gene ID 1613557_at
Gene name
Homology with ArabidopsisSimilar to At4g37640: ACA2 (CALCIUM ATPASE 2) (HF=4e-66)
Module size 6 genes
NF 0.03
%ile 6.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.921613557_atBM436858--4e-66At4g37640ACA2 (CALCIUM ATPASE 2)O.I.H.G.S.X.
0.1111.30.971614286_atCB970515hypothetical protein LOC100240938-9e-6At1g54610protein kinase family proteinO.I.H.G.S.X.
0.056.00.971619392_atCF513478hypothetical protein LOC100259847-4e+0At3g24060self-incompatibility protein-relatedO.I.H.G.S.X.
0.023.20.961621744_atCF510924hypothetical protein LOC100252902-5e-53At5g27430signal peptidase subunit family proteinO.I.H.G.S.X.
0.023.20.971609452_atBQ794280hypothetical protein LOC100249768-3e-1At4g31460ribosomal protein L28 family proteinO.I.H.G.S.X.
0.012.10.971612039_atBQ799884hypothetical protein LOC100266651-1e-18At2g03870small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.9GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.597.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
4.597.5GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.796.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.595.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.395.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.993.8GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.993.8GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.893.4GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.591.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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