Co-expression analysis

Gene ID	1613521_at
Gene name	metallothionein
Homology with Arabidopsis	Similar to At3g09390: MT2A (METALLOTHIONEIN 2A) (HF=5e-19)
Module size	10 genes
NF	0.16
%ile	25.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.96	1613521_at	CF514518	metallothionein	-	5e-19	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.97	1607049_s_at	CF514518	metallothionein	-	5e-19	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1621583_at	CF404733	hypothetical protein LOC100266937	-	3e-12	At1g05850	POM1 (POM-POM1)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1607928_at	CF201793.1	-	-	5e-3	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.98	1607580_s_at	AF501624.1	similar to histone H3 /// similar to histone H3	-	6e-87	At4g40040	histone H3.2	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.97	1609966_a_at	BQ798735	hypothetical protein LOC100249980 /// hypothetical protein LOC100245503	-	3e-1	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.98	1615754_at	CF213398	-	-	3e-41	At5g65470	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.98	1616840_at	CF608637	hypothetical protein LOC100255499	-	9e-15	At1g09140	SF2/ASF-like splicing modulator (SRP30)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.97	1615991_s_at	CF404409	hypothetical protein LOC100241833	-	1e-22	At4g38130	HD1 (HISTONE DEACETYLASE 1)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.97	1612757_at	CD801743	hypothetical protein LOC100241266	-	1e+0	At2g32560	F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.4	95.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.0	94.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.8	93.4	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.7	93.0	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.6	92.5	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.4	91.3	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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