Co-expression analysis

Gene ID 1613521_at
Gene name metallothionein
Homology with ArabidopsisSimilar to At3g09390: MT2A (METALLOTHIONEIN 2A) (HF=5e-19)
Module size 10 genes
NF 0.16
%ile 25.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.961613521_atCF514518metallothionein-5e-19At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.
0.6384.30.971607049_s_atCF514518metallothionein-5e-19At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.
0.2837.70.971621583_atCF404733hypothetical protein LOC100266937-3e-12At1g05850POM1 (POM-POM1)O.I.H.G.S.X.
0.2734.00.971607928_atCF201793.1--5e-3At4g08230glycine-rich proteinO.I.H.G.S.X.
0.2022.40.981607580_s_atAF501624.1similar to histone H3 /// similar to histone H3-6e-87At4g40040histone H3.2O.I.H.G.S.X.
0.1819.40.971609966_a_atBQ798735hypothetical protein LOC100249980 /// hypothetical protein LOC100245503-3e-1At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)O.I.H.G.S.X.
0.1718.20.981615754_atCF213398--3e-41At5g65470unknown proteinO.I.H.G.S.X. protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X. protein LOC100241833-1e-22At4g38130HD1 (HISTONE DEACETYLASE 1)O.I.H.G.S.X. protein LOC100241266-1e+0At2g32560F-box family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.094.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.094.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.893.4GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.793.0GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.692.5GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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