Co-expression analysis

Gene ID	1613468_at
Gene name	hypothetical protein LOC100250231
Homology with Arabidopsis	Similar to At3g04730: IAA16 (HF=3e-55)
Module size	6 genes
NF	0.53
%ile	78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.1	0.97	1613468_at	CF405048	hypothetical protein LOC100250231	-	3e-55	At3g04730	IAA16	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1617158_at	CB920605	hypothetical protein LOC100251931	-	4e-17	At5g19630	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1612088_at	CF403659	hypothetical protein LOC100252369	-	6e-1	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1618481_at	CF213085	hypothetical protein LOC100266840	-	1e-13	At1g65320	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1606933_a_at	CB007886	-	-	1e-20	At1g01360	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1619736_at	CF210461	hypothetical protein LOC100241098	-	3e-30	At5g04460	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.7	93.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.4	91.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.2	89.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.1	89.1	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.1	89.1	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.0	88.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.0	88.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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