Co-expression analysis

Gene ID 1613446_at
Gene name
Homology with ArabidopsisSimilar to At5g59050: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.14
%ile 22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.831613446_atCF405907--3e+0At5g59050unknown proteinO.I.H.G.S.X.
0.2225.60.941615053_atCD711659--1e+0At4g39986unknown proteinO.I.H.G.S.X.
0.1414.40.961612097_atCB348571--6e-5At4g23400PIP1O.I.H.G.S.X.
0.1313.30.941606581_atCF210843--3e-13At5g12350Ran GTPase binding / chromatin binding / zinc ion bindingO.I.H.G.S.X.
0.1111.30.941612545_atCB007109--1e+1At5g08190NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT B12)O.I.H.G.S.X.
0.077.80.931608276_atCF405421--2e+0At2g03710SEP4 (SEPALLATA 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.796.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
3.696.0GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
3.495.5GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
3.395.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.395.2GSM147702Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation31Link to GEO
3.294.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
3.294.9GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.793.0GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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