Co-expression analysis

Gene ID	1613368_at
Gene name	hypothetical protein LOC100243457
Homology with Arabidopsis	Similar to At4g24920: protein transport protein SEC61 gamma subunit, putative (HF=1e-1)
Module size	7 genes
NF	0.16
%ile	24.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.94	1613368_at	CF211784	hypothetical protein LOC100243457	-	1e-1	At4g24920	protein transport protein SEC61 gamma subunit, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.94	1609484_at	CF415181	hypothetical protein LOC100248894	-	1e-9	At5g46690	bHLH071 (beta HLH protein 71)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.94	1608335_at	CF209188	hypothetical protein LOC100241691	-	7e-3	At3g28690	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1612206_at	CD800449	hypothetical protein LOC100252884	-	9e-1	At2g20660	RALFL14 (ralf-like 14)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.94	1613004_s_at	CF213768	hypothetical protein LOC100266950	-	3e-2	At5g40630	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.94	1620151_at	CB349827	hypothetical protein LOC100257621	-	4e+0	At1g02620	GTP-binding protein (SAR1A)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.94	1614415_at	BQ796809	hypothetical protein LOC100258808	-	2e+0	At2g03470	myb family transcription factor / ELM2 domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.0	99.8	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.9	97.9	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.9	97.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.0	88.2	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
1.9	87.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.8	86.0	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
1.8	86.0	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
1.8	86.0	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
1.8	86.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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