Co-expression analysis

Gene ID 1613363_at
Gene name
Homology with ArabidopsisSimilar to At4g37330: CYP81D4 (HF=3e-1)
Module size 6 genes
NF 0.43
%ile 64.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.941613363_atCD717516--3e-1At4g37330CYP81D4O.I.H.G.S.X.
0.5072.70.981612637_atCB982953hypothetical protein LOC100259097-2e-3At5g13390NEF1 (NO EXINE FORMATION 1)O.I.H.G.S.X.
0.4361.50.981614555_atCF518554hypothetical protein LOC100254478-2e-13At5g45300BMY2 (BETA-AMYLASE 2)O.I.H.G.S.X.
0.4057.70.991612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)O.I.H.G.S.X.
0.2734.00.981611958_atBQ800100hypothetical protein LOC100265795-8e-18At5g66930unknown proteinO.I.H.G.S.X.
0.2124.00.981621006_atCF513092--5e+0At5g24820aspartyl protease family proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5072.70.981606739_atCF404951hypothetical protein LOC100259356-4e+0At2g25060plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.5072.70.981613755_atCB975521hypothetical protein LOC100253264-9e-2At4g04080ISU3 (ISCU-LIKE 3)O.I.H.G.S.X.
0.4464.10.971611066_atBQ800273similar to ATRAPTOR1B/RAPTOR1B (RAPTOR1); nucleotide binding / protein binding-1e+0At1g77910unknown proteinO.I.H.G.S.X.
0.4057.70.971616261_s_atCK136887.1hypothetical protein LOC100257245-2e-8At5g03500transcription coactivatorO.I.H.G.S.X.
0.3345.70.981618757_atBQ796143hypothetical protein LOC100263172-2e-44At4g14500-O.I.H.G.S.X.
0.3141.30.971618545_a_atCB346750hypothetical LOC100265979-2e-50At1g12270stress-inducible protein, putativeO.I.H.G.S.X.
0.3141.30.981618667_s_atCB339921similar to predicted protein-4e-20At5g46020unknown proteinO.I.H.G.S.X.
0.2937.70.951621733_atCD712090--1e-19At5g49930emb1441 (embryo defective 1441)O.I.H.G.S.X.
0.2937.70.971607339_atCB973261--3e-1At4g25280adenylate kinase family proteinO.I.H.G.S.X.
0.2937.70.981611766_atCF371956hypothetical protein LOC100248418-5e+0Atmg00150-O.I.H.G.S.X.
0.2837.70.981613364_atCD720561hypothetical protein LOC100254952-3e-71At3g14270phosphatidylinositol-4-phosphate 5-kinase family proteinO.I.H.G.S.X.
0.2734.00.971621744_atCF510924hypothetical protein LOC100252902-5e-53At5g27430signal peptidase subunit family proteinO.I.H.G.S.X.
0.2734.00.981618642_atCF604519hypothetical protein LOC100265629-5e-13At5g51410LUC7 N_terminus domain-containing proteinO.I.H.G.S.X.
0.2530.50.961614325_atBQ797780--4e+0At5g01870lipid transfer protein, putativeO.I.H.G.S.X.
0.2530.50.981618977_atCB969477hypothetical protein LOC100241190-4e-1At4g18720transcription elongation factor-relatedO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.398.2GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
5.198.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
5.198.1GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
4.597.5GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.597.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
4.497.3GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
4.196.9GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.196.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
4.096.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
4.096.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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