Co-expression analysis

Gene ID 1613363_at
Gene name
Homology with ArabidopsisSimilar to At4g37330: CYP81D4 (HF=3e-1)
Module size 6 genes
NF 0.43
%ile 64.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.941613363_atCD717516--3e-1At4g37330CYP81D4O.I.H.G.S.X.
0.5072.70.981612637_atCB982953hypothetical protein LOC100259097-2e-3At5g13390NEF1 (NO EXINE FORMATION 1)O.I.H.G.S.X.
0.4361.50.981614555_atCF518554hypothetical protein LOC100254478-2e-13At5g45300BMY2 (BETA-AMYLASE 2)O.I.H.G.S.X.
0.4057.70.991612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)O.I.H.G.S.X.
0.2734.00.981611958_atBQ800100hypothetical protein LOC100265795-8e-18At5g66930unknown proteinO.I.H.G.S.X.
0.2124.00.981621006_atCF513092--5e+0At5g24820aspartyl protease family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.398.2GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
5.198.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
5.198.1GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
4.597.5GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.597.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
4.497.3GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
4.196.9GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.196.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
4.096.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
4.096.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage