Co-expression analysis

Gene ID	1613254_at
Gene name
Homology with Arabidopsis	Similar to At1g29980: - (HF=7e-8)
Module size	7 genes
NF	0.31
%ile	45.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.95	1613254_at	CF568816	-	-	7e-8	At1g29980	-	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1617789_at	BQ798936	hypothetical protein LOC100246450	-	4e+0	Atmg00890	-	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1614723_at	CF373226	hypothetical protein LOC100259737	-	4e-1	At5g62060	F-box family protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.96	1617526_s_at	CB972978	hypothetical protein LOC100250396	-	8e-1	At2g10920	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.96	1610567_at	CF212759	-	-	3e-5	At3g48185	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.95	1621559_at	CF415172	hypothetical protein LOC100262734	-	3e-51	At3g28860	ABCB19	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1616806_at	CF605749	hypothetical protein LOC100259004	-	6e-2	At2g01340	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.4	91.3	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436377	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147702	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	31
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.8	86.0	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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